Hiyori Iki is a normal middle school student until she was involved in a bus accident while trying to protect a stranger. This incident causes her soul to frequently slip out of her body, and she becomes aware of the existence of two parallel worlds. Through her soul, she meets the strange, nameless god without a shrine, Yato. Yato is determined to make a name for himself out there by accepting any wishes for 5 yen, including Hiyori's to fix her body.